| Modesto Christian School | 0.2 |
653 | 90.0% | 4.6% | 3.1% | - | 2.3% |
| Brethren Heritage School | 2.3 |
107 | 98.1% | - | - | - | 1.9% |
| St Felicissimus School | 2.5 |
12 | 33.3% | 66.7% | - | - | - |
| Ripon Christian Schools | 3.2 |
694 | 92.1% | 4.9% | 1.4% | - | 1.6% |
| Wood Colony Brethren School | 3.4 |
100 | 95.0% | 4.0% | - | - | 1.0% |
| Big Valley Christian | 4.0 |
855 | 83.3% | 11.0% | 3.2% | - | 2.6% |
| Mountain View Baptist Academy | 5.0 |
16 | 100.0% | - | - | - | - |
| New Harvest Christian | 5.7 |
25 | 28.0% | 72.0% | - | - | - |
| St Thomas Aquinas Academy | 7.0 |
548 | 71.9% | 11.9% | 11.9% | - | 4.4% |
| South San Joaquin Education Center | 7.5 |
19 | 47.4% | 10.5% | 36.8% | 5.3% | - |
| Riverbank Christian Academy | 7.7 |
6 | - | 100.0% | - | - | - |
| Central Valley Baptist School | 9.8 |
41 | 29.3% | 53.7% | - | - | 17.1% |
| Castillo Christian | 10.0 |
101 | 46.5% | 45.5% | 5.0% | - | 3.0% |
| Central Valley Christian Academy | 10.4 |
263 | 67.3% | 23.2% | 3.0% | - | 6.5% |
| Berean Christian School | 17.8 |
27 | 77.8% | 7.4% | 7.4% | - | 7.4% |
| West Valley Christian School | 18.2 |
16 | 56.2% | 18.8% | 12.5% | - | 12.5% |
| Apostolic Christian Academy | 18.5 |
26 | - | 96.2% | 3.8% | - | - |
| Reyn Franca School | 18.9 |
61 | 49.2% | 24.6% | 24.6% | - | 1.6% |
| Samuel N Hancock School | 19.2 |
22 | 9.1% | 4.5% | 86.4% | - | - |
| Turlock Christian Schools Inc | 19.4 |
505 | 90.1% | 6.7% | 1.2% | - | 2.0% |
| Children's Home Of Stockton Nps | 19.6 |
106 | 44.3% | 16.0% | 36.8% | 0.9% | 1.9% |
| New Harvest Christian School | 20.4 |
29 | - | 100.0% | - | - | - |
| Stockton Baptist School | 22.1 |
54 | 53.7% | 18.5% | 9.3% | - | 18.5% |
| Stockton Christian School | 24.4 |
271 | 18.1% | 62.0% | 12.2% | 0.7% | 7.0% |
