| Christian Heritage Academy | 0.7 |
Regular elementary or secondary | Pre-KG-8 | 152 | 12.7 | Church of the Nazarene |
| A Childs Place Montessori | 2.0 |
Montessori | Pre-KG-KG | 5 | 3.1 | Nonsectarian |
| Morning Star School | 2.5 |
Special education | KG-8 | 111 | 9.6 | Roman Catholic |
| Christ The King Catholic School | 2.6 |
Regular elementary or secondary | Pre-KG-8 | 393 | 14.4 | Roman Catholic |
| The Depaul School Of Ne Florid | 2.6 |
Special education | 2-8 | 112 | 9.3 | Nonsectarian |
| Blessed Trinity Catholic School | 3.0 |
Regular elementary or secondary | Pre-KG-8 | 237 | 20.8 | Roman Catholic |
| Assumption Catholic School | 3.1 |
Regular elementary or secondary | Pre-KG-8 | 458 | 17.9 | Roman Catholic |
| San Jose Catholic Grade School | 3.5 |
Regular elementary or secondary | Pre-KG-8 | 462 | 19.3 | Roman Catholic |
| Parkwood Kindergarten & Preschool | 3.8 |
Early childhood program/child care center | Pre-KG-KG | 3 | 1.6 | Christian (no specific denomination) |
| San Jose Episcopal Day School | 3.8 |
Regular elementary or secondary | Pre-KG-6 | 420 | 13.6 | Episcopal |
| Eagle Academy | 3.9 |
Regular elementary or secondary | Pre-KG-7 | 128 | 11.0 | Christian (no specific denomination) |
| Al-furqan Academy | 4.2 |
Regular elementary or secondary | Pre-KG-5 | 51 | 6.1 | Islamic |
| Academie De Montessori | 4.2 |
Montessori | Pre-KG-4 | 23 | 5.8 | Nonsectarian |
| Ft Caroline Learning Tree | 4.5 |
Montessori | Pre-KG-4 | 52 | 14.4 | Christian (no specific denomination) |
| Jca - Gan Yeladim | 4.7 |
Early childhood program/child care center | Pre-KG-KG | 14 | 7.0 | Jewish |
| Shepherd Of The Woods Lutheran School | 4.8 |
Early childhood program/child care center | Pre-KG-KG | 9 | 6.9 | Evangelical Lutheran Church in America |
| Holy Family Catholic School | 4.8 |
Regular elementary or secondary | Pre-KG-8 | 352 | 10.6 | Roman Catholic |
| Baymeadows Baptist Day School | 4.8 |
Regular elementary or secondary | Pre-KG-6 | 114 | 11.4 | Baptist |
| Resurrection Parish School | 5.0 |
Regular elementary or secondary | Pre-KG-8 | 192 | 13.9 | Roman Catholic |
| Jacksonville Country Day School | 5.5 |
Regular elementary or secondary | Pre-KG-6 | 456 | 12.9 | Nonsectarian |
| Riverside Presbyterian Day School | 5.5 |
Regular elementary or secondary | Pre-KG-6 | 407 | 10.1 | Presbyterian |
| St Stephen Child Care & Learning Center | 5.8 |
Early childhood program/child care center | Pre-KG-KG | 61 | 30.5 | African Methodist Episcopal |
| St Paul's Catholic Elementary School-riverside | 6.2 |
Regular elementary or secondary | Pre-KG-8 | 221 | 18.7 | Roman Catholic |
| Clarke Jacksonville Auditory/oral Center | 6.4 |
Special education | Pre-KG-2 | 12 | 6.0 | Nonsectarian |
| St Marks Episcopal Day School | 6.7 |
Regular elementary or secondary | Pre-KG-6 | 283 | 11.1 | Episcopal |
| Martin J Gottlieb Day School | 6.7 |
Special program emphasis | KG-8 | 135 | 9.7 | Jewish |
| St Pius V Catholic School | 6.8 |
Regular elementary or secondary | Pre-KG-8 | 163 | 13.5 | Roman Catholic |
| Ft Caroline Baptist Academy | 6.8 |
Regular elementary or secondary | Pre-KG-4 | 33 | 6.1 | Baptist |
| Holy Rosary Catholic School | 6.9 |
Regular elementary or secondary | Pre-KG-8 | 180 | 20.0 | Roman Catholic |
| Torah Academy Of Jacksonville | 7.0 |
Regular elementary or secondary | Pre-KG-6 | 24 | 3.8 | Jewish |
| Holy Spirit Catholic School | 7.3 |
Regular elementary or secondary | Pre-KG-8 | 253 | 16.2 | Roman Catholic |
| Grace Lutheran School | 7.7 |
Regular elementary or secondary | Pre-KG-8 | 202 | 19.2 | Lutheran Church - Missouri Synod |
| Chosen Vessels | 7.8 |
Regular elementary or secondary | KG-1 | 62 | 31.0 | Christian (no specific denomination) |
| Chosen Vessels | 7.8 |
Regular elementary or secondary | KG-1 | 13 | 6.5 | Pentecostal |
| Jacksonville Adventist Academy | 7.8 |
Regular elementary or secondary | Pre-KG-8 | 85 | 13.5 | Seventh-Day Adventist |
| Abc Christian Academy | 7.8 |
Regular elementary or secondary | Pre-KG-6 | 102 | 11.3 | Baptist |
| St Matthew Catholic School | 7.9 |
Regular elementary or secondary | Pre-KG-8 | 245 | 12.4 | Roman Catholic |
| Joshua Christian Academy | 8.1 |
Regular elementary or secondary | Pre-KG-8 | 201 | 10.6 | Christian (no specific denomination) |
| Guardian Lutheran School | 8.1 |
Regular elementary or secondary | Pre-KG-8 | 88 | 12.6 | Lutheran Church - Missouri Synod |
| S A Hull Kindergarten | 8.3 |
Early childhood program/child care center | Pre-KG-KG | 8 | 8.0 | Nonsectarian |
| St Joseph Catholic School | 8.8 |
Regular elementary or secondary | KG-8 | 542 | 21.4 | Roman Catholic |
| Promise Land Academy | 9.0 |
Regular elementary or secondary | KG-5 | 53 | 11.0 | Baptist |
| Cedar Hills Baptist Christian School | 9.5 |
Regular elementary or secondary | Pre-KG-8 | 198 | 11.7 | Baptist |
| Sacred Heart School | 9.5 |
Regular elementary or secondary | Pre-KG-8 | 483 | 20.1 | Roman Catholic |
| St Patrick's Catholic School | 9.9 |
Regular elementary or secondary | Pre-KG-8 | 171 | 16.1 | Roman Catholic |
| Center Academy-westside Jacksonville | 10.1 |
Regular elementary or secondary | 3-8 | 69 | 17.2 | Nonsectarian |
| The Little Country School | 10.6 |
Regular elementary or secondary | Pre-KG-8 | 51 | 10.2 | Nonsectarian |
| The Beaches School | 10.6 |
Regular elementary or secondary | Pre-KG-8 | 46 | 5.8 | Nonsectarian |
| Highlands Baptist Weekday Ministry | 10.6 |
Early childhood program/child care center | KG-KG | 7 | 6.4 | Baptist |
| Little Lindas Day Care & Christian Academy | 10.6 |
Early childhood program/child care center | Pre-KG-Trans. KG | 3 | 0.8 | Pentecostal |
| Grace Episcopal Day School | 10.7 |
Regular elementary or secondary | Pre-KG-6 | 180 | 17.1 | Episcopal |
| A Child's Place Montessori School | 10.7 |
Montessori | Pre-KG-3 | 103 | 51.5 | Nonsectarian |
| Wonderworks | 10.7 |
Early childhood program/child care center | Pre-KG-KG | 10 | 10.0 | Christian (no specific denomination) |
| Beverley Hills Development Center | 10.7 |
Early childhood program/child care center | Pre-KG-KG | 7 | 7.0 | Baptist |
| Chatman Early Learning Christian Academy | 10.9 |
Regular elementary or secondary | KG-5 | 34 | 6.8 | Baptist |
| Discovery Montessori School | 11.0 |
Montessori | Pre-KG-5 | 63 | 5.0 | Nonsectarian |
| Montessori Tides School | 11.1 |
Montessori | Pre-KG-8 | 64 | 7.1 | Nonsectarian |
| Beaches Chapel School | 11.5 |
Regular elementary or secondary | Pre-KG-8 | 152 | 10.8 | Christian (no specific denomination) |
| Beaches Episcopal School | 11.7 |
Regular elementary or secondary | Pre-KG-6 | 255 | 9.6 | Episcopal |
| Community Presbyterian Preschool & Kdgn | 11.7 |
Early childhood program/child care center | Pre-KG-KG | 9 | 9.0 | Presbyterian |
| St Paul Elementary School | 11.8 |
Regular elementary or secondary | Pre-KG-8 | 534 | 16.0 | Roman Catholic |
| Argyle Christian Preschool And Kindergarten | 11.9 |
Early childhood program/child care center | Pre-KG-KG | 12 | 6.0 | Baptist |
| San Juan Del Rio Catholic School | 12.6 |
Regular elementary or secondary | 1-8 | 234 | 18.0 | Roman Catholic |
| Christ Episcopal Preschool | 13.4 |
Early childhood program/child care center | Pre-KG-KG | 19 | 7.3 | Episcopal |
| Orange Park Kindergarten | 13.9 |
Early childhood program/child care center | Pre-KG-KG | 4 | 4.0 | Nonsectarian |
| Accotink Academy | 14.0 |
Regular elementary or secondary | Pre-KG-1 | 23 | 6.6 | Nonsectarian |
| Palmer Catholic Academy | 14.3 |
Regular elementary or secondary | KG-8 | 452 | 18.1 | Roman Catholic |
| New Beginnings Preschool | 15.7 |
Early childhood program/child care center | Pre-KG-KG | 8 | 8.0 | Baptist |
| St Johns Grammar School | 15.9 |
Regular elementary or secondary | Pre-KG-8 | 76 | 7.3 | Christian (no specific denomination) |
| West Meadows Baptist Academy | 16.0 |
Early childhood program/child care center | Pre-KG-KG | 10 | 0.6 | Baptist |
| Arlington Kindergarten | 16.2 |
Early childhood program/child care center | Pre-KG-KG | 10 | 10.0 | Nonsectarian |
| Pinewood Christian Academy | 17.5 |
Regular elementary or secondary | Pre-KG-8 | 233 | 14.1 | Christian (no specific denomination) |
| Annunciation Catholic School | 18.0 |
Regular elementary or secondary | Pre-KG-8 | 399 | 17.9 | Roman Catholic |
| Amelia Island Montessori | 21.4 |
Montessori | Pre-KG-6 | 52 | 4.2 | Nonsectarian |
