| Holy Redeemer Elem School | 7.3 |
Regular elementary or secondary | Pre-KG-8 | 93 | 10.3 | Roman Catholic |
| St John The Baptist | 8.9 |
Regular elementary or secondary | Pre-KG-6 | 123 | 12.9 | Roman Catholic |
| Holy Cross Catholic School | 9.4 |
Regular elementary or secondary | Pre-KG-8 | 155 | 13.0 | Roman Catholic |
| Trinity Lutheran School | 10.8 |
Regular elementary or secondary | Pre-KG-8 | 56 | 11.2 | Wisconsin Evangelical Lutheran Synod |
| Our Lady Of The Prairie School | 11.0 |
Regular elementary or secondary | Pre-KG-6 | 50 | 10.0 | Roman Catholic |
| St Michael School | 13.8 |
Regular elementary or secondary | Pre-KG-8 | 486 | 17.4 | Roman Catholic |
| St Paul's Lutheran School | 15.0 |
Regular elementary or secondary | Pre-KG-6 | 46 | 8.7 | Lutheran Church - Missouri Synod |
| Shakopee Area Catholic School | 16.5 |
Regular elementary or secondary | Pre-KG-8 | 741 | 17.2 | Roman Catholic |
| Guardian Angels Elem School | 16.7 |
Regular elementary or secondary | Pre-KG-8 | 216 | 12.7 | Roman Catholic |
| St John's Lutheran School | 16.9 |
Regular elementary or secondary | Pre-KG-8 | 235 | 13.2 | Lutheran Church - Missouri Synod |
| Living Hope Lutheran School | 17.0 |
Regular elementary or secondary | Pre-KG-4 | 94 | 20.4 | Wisconsin Evangelical Lutheran Synod |
| St Anne Elementary School | 17.3 |
Regular elementary or secondary | KG-6 | 65 | 8.6 | Roman Catholic |
| Step By Step Montessori | 18.1 |
Montessori | KG-KG | 24 | 24.0 | Nonsectarian |
| Zion Lutheran School | 18.3 |
Regular elementary or secondary | Pre-KG-8 | 66 | 12.2 | Lutheran Church - Missouri Synod |
| All Saints Catholic School | 18.3 |
Regular elementary or secondary | KG-8 | 343 | 16.3 | Roman Catholic |
| American Montessori Inc (the) | 18.7 |
Early childhood program/child care center | Pre-KG-KG | 12 | 12.0 | Nonsectarian |
| St Bernard Elementary School | 18.8 |
Regular elementary or secondary | Pre-KG-6 | 48 | 8.6 | Roman Catholic |
| Jonathan Montessori School | 19.2 |
Montessori | Pre-KG-KG | 18 | 6.0 | Nonsectarian |
| Trinity Lutheran School | 19.2 |
Regular elementary or secondary | KG-8 | 29 | 9.3 | Lutheran Church - Missouri Synod |
| St John The Baptist Catholic School | 19.9 |
Regular elementary or secondary | Pre-KG-8 | 628 | 19.1 | Roman Catholic |
| Good Shepherd Lutheran School | 20.2 |
Regular elementary or secondary | Pre-KG-8 | 105 | 17.2 | Wisconsin Evangelical Lutheran Synod |
| Berean Education Center | 20.2 |
Early childhood program/child care center | Pre-KG-KG | 9 | 9.0 | Other |
| Woodpark Montessori | 20.6 |
Montessori | Pre-KG-KG | 12 | 12.0 | Nonsectarian |
| Christian Heritage Academy | 20.6 |
Regular elementary or secondary | Pre-KG-8 | 106 | 8.9 | Christian (no specific denomination) |
| Bloomington Lutheran School | 20.8 |
Regular elementary or secondary | Pre-KG-8 | 203 | 18.3 | Wisconsin Evangelical Lutheran Synod |
| St Dominic Elementary School | 21.1 |
Regular elementary or secondary | Pre-KG-8 | 159 | 13.4 | Roman Catholic |
| Northfield Montessori | 21.3 |
Montessori | Pre-KG-KG | 20 | 20.0 | Nonsectarian |
| Abc International Montessori Academy | 21.4 |
Montessori | Pre-KG-6 | 31 | 8.0 | Nonsectarian |
| Children Of Tomorrow | 21.4 |
Early childhood program/child care center | Pre-KG-KG | 6 | 6.0 | Nonsectarian |
| St Hubert Elementary School | 21.6 |
Regular elementary or secondary | KG-8 | 690 | 18.6 | Roman Catholic |
| Chapel Hill Academy | 22.1 |
Regular elementary or secondary | KG-8 | 363 | 16.6 | Christian (no specific denomination) |
| Life Academy | 22.5 |
Regular elementary or secondary | Pre-KG-8 | 111 | 10.6 | Church of God |
| Faribault Lutheran School | 22.7 |
Regular elementary or secondary | KG-8 | 161 | 14.9 | Lutheran Church - Missouri Synod |
| Minnehaha Academy | 22.9 |
Regular elementary or secondary | KG-5 | 74 | 7.5 | Other |
| Divine Mercy Catholic School | 23.0 |
Regular elementary or secondary | Pre-KG-6 | 281 | 14.5 | Roman Catholic |
| Trinity Lutheran School | 23.3 |
Regular elementary or secondary | Pre-KG-8 | 271 | 16.6 | Lutheran Church - Missouri Synod |
| St Josephs School | 23.5 |
Regular elementary or secondary | Pre-KG-8 | 317 | 13.8 | Roman Catholic |
| St John S Lutheran School | 23.6 |
Regular elementary or secondary | Pre-KG-8 | 117 | 16.7 | Lutheran Church - Missouri Synod |
| Eden Prairie Montessori Learning Center | 23.6 |
Montessori | Pre-KG-KG | 5 | 2.5 | Nonsectarian |
| Nativity Of Mary School | 23.8 |
Regular elementary or secondary | KG-8 | 361 | 16.7 | Roman Catholic |
| Parkside Christian School | 24.0 |
Regular elementary or secondary | KG-8 | 9 | 4.5 | Seventh-Day Adventist |
| Heritage Lutheran | 24.0 |
Early childhood program/child care center | Pre-KG-Trans. KG | 11 | 18.3 | Other Lutheran |
| Emanuel Lutheran School | 24.1 |
Regular elementary or secondary | Pre-KG-8 | 77 | 12.0 | Lutheran Church - Missouri Synod |
| Our Savior Lutheran School | 24.2 |
Regular elementary or secondary | KG-8 | 148 | 9.9 | Lutheran Church - Missouri Synod |
| St Peter Lutheran School | 24.4 |
Regular elementary or secondary | Pre-KG-8 | 42 | 12.3 | Wisconsin Evangelical Lutheran Synod |
| St John The Baptist School | 24.5 |
Regular elementary or secondary | Pre-KG-8 | 144 | 13.2 | Roman Catholic |
| Ramalynn Montessori Academy | 24.5 |
Montessori | Pre-KG-8 | 102 | 6.3 | Nonsectarian |
| River Hills Early Childhood Ct | 24.6 |
Early childhood program/child care center | Pre-KG-KG | 10 | 6.2 | Christian (no specific denomination) |
| First Baptist Schools | 24.7 |
Regular elementary or secondary | Pre-KG-5 | 183 | 9.6 | Baptist |
| Spring Hill School | 24.8 |
Special program emphasis | Pre-KG-8 | 98 | 6.7 | Nonsectarian |
| John Ireland School | 24.9 |
Regular elementary or secondary | KG-6 | 90 | 11.2 | Roman Catholic |
