| St Martin Elementary School | 0.0 |
Regular elementary or secondary | KG-8 | 220 | 17.7 | Roman Catholic |
| St Joseph Cathedral School | 6.8 |
Regular elementary or secondary | Pre-KG-8 | 410 | 17.4 | Roman Catholic |
| Trinity Lutheran School | 8.4 |
Regular elementary or secondary | KG-8 | 319 | 15.1 | Lutheran Church - Missouri Synod |
| St Peter Interparish Catholic School | 8.7 |
Regular elementary or secondary | KG-KG | 60 | 2.0 | Roman Catholic |
| Kim School | 9.0 |
Montessori | Pre-KG-KG | 10 | 3.9 | Nonsectarian |
| Moreau Montessori School | 9.4 |
Montessori | Pre-KG-3 | 34 | 8.7 | Nonsectarian |
| Immaculate Conception School | 9.8 |
Regular elementary or secondary | KG-8 | 468 | 13.4 | Roman Catholic |
| Immanuel Lutheran School | 10.4 |
Regular elementary or secondary | Pre-KG-8 | 67 | 12.6 | Lutheran Church - Missouri Synod |
| St Stanislaus School | 11.3 |
Regular elementary or secondary | KG-8 | 243 | 14.6 | Roman Catholic |
| St Francis Xavier School | 12.0 |
Regular elementary or secondary | KG-8 | 187 | 12.6 | Roman Catholic |
| St Thomas The Apostle School | 16.8 |
Regular elementary or secondary | KG-8 | 74 | 12.1 | Roman Catholic |
| South Latham School | 20.1 |
Regular elementary or secondary | 1-8 | 24 | 8.0 | Mennonite |
| Hazel Dell School | 20.5 |
Regular elementary or secondary | 1-8 | 25 | 12.5 | Mennonite |
| Apple School | 20.7 |
Early childhood program/child care center | Pre-KG-KG | 1 | 0.9 | Nonsectarian |
| Prairie Union School | 20.8 |
Regular elementary or secondary | 1-8 | 30 | 15.0 | Mennonite |
| Eldon Montessori Children's House | 20.8 |
Montessori | Pre-KG-Trans. KG | 1 | 0.3 | Nonsectarian |
| Dogwood Grove School | 21.4 |
Regular elementary or secondary | 1-8 | 27 | 13.5 | Mennonite |
| St Joseph Catholic School | 21.7 |
Regular elementary or secondary | KG-8 | 213 | 15.3 | Roman Catholic |
| Christian Chapel Academy | 22.2 |
Regular elementary or secondary | Pre-KG-8 | 153 | 12.9 | Assembly of God |
| Childrens House Montessori Of Columbia | 24.0 |
Montessori | Pre-KG-1 | 16 | 8.4 | Nonsectarian |
| St Andrew School | 24.5 |
Regular elementary or secondary | 1-8 | 121 | 11.6 | Roman Catholic |
| St Marys School | 24.5 |
Regular elementary or secondary | 1-8 | 41 | 9.5 | Roman Catholic |
| Good Shepherd Lutheran School | 24.5 |
Regular elementary or secondary | KG-7 | 94 | 14.2 | Lutheran Church - Missouri Synod |
| Islamic School Of Columbia-missouri | 24.6 |
Regular elementary or secondary | Pre-KG-5 | 30 | 4.3 | Islamic |
