| St Joseph Elementary School | 10.0 |
Regular elementary or secondary | 1-8 | 48 | 8.3 | Roman Catholic |
| Ss Peter & Paul School | 10.4 |
Regular elementary or secondary | KG-8 | 173 | 15.3 | Roman Catholic |
| St Andrew School | 12.1 |
Regular elementary or secondary | 1-8 | 121 | 11.6 | Roman Catholic |
| South Latham School | 20.0 |
Regular elementary or secondary | 1-8 | 24 | 8.0 | Mennonite |
| Hazel Dell School | 20.3 |
Regular elementary or secondary | 1-8 | 25 | 12.5 | Mennonite |
| Good Shepherd Lutheran School | 21.3 |
Regular elementary or secondary | KG-7 | 94 | 14.2 | Lutheran Church - Missouri Synod |
| Columbia Catholic School | 22.0 |
Regular elementary or secondary | KG-8 | 611 | 17.3 | Roman Catholic |
| Apple School | 22.0 |
Early childhood program/child care center | Pre-KG-KG | 1 | 0.9 | Nonsectarian |
| Prairie Union School | 22.3 |
Regular elementary or secondary | 1-8 | 30 | 15.0 | Mennonite |
| Christian Chapel Academy | 22.5 |
Regular elementary or secondary | Pre-KG-8 | 153 | 12.9 | Assembly of God |
| Childrens House Montessori Of Columbia | 23.2 |
Montessori | Pre-KG-1 | 16 | 8.4 | Nonsectarian |
| Islamic School Of Columbia-missouri | 23.3 |
Regular elementary or secondary | Pre-KG-5 | 30 | 4.3 | Islamic |
| Sedalia Sda School | 23.8 |
Regular elementary or secondary | KG-8 | 14 | 7.0 | Seventh-Day Adventist |
| Dogwood Grove School | 24.1 |
Regular elementary or secondary | 1-8 | 27 | 13.5 | Mennonite |
