| St Michael Elementary School | 0.0 |
Regular elementary or secondary | Pre-KG-8 | 118 | 10.2 | Roman Catholic |
| East Palmyra Christian School | 4.0 |
Regular elementary or secondary | Pre-KG-8 | 60 | 8.8 | Christian (no specific denomination) |
| Clyde Mennonite Parochial School | 8.9 |
Regular elementary or secondary | 1-8 | 36 | 12.4 | Mennonite |
| Children's Hours School | 13.2 |
Alternative/other | Pre-KG-1 | 7 | 2.1 | Nonsectarian |
| St Francis De Sales-st Stephen | 13.3 |
Regular elementary or secondary | Pre-KG-8 | 158 | 13.6 | Roman Catholic |
| Canandaigua Montessori School | 13.6 |
Montessori | Pre-KG-KG | 7 | 3.5 | Nonsectarian |
| St Mary School | 14.2 |
Regular elementary or secondary | Pre-KG-8 | 168 | 10.5 | Roman Catholic |
| Tot-al Care Kindergarten | 17.9 |
Early childhood program/child care center | Pre-KG-KG | 7 | 7.0 | Nonsectarian |
| Fairport Montessori School | 18.1 |
Montessori | 1-1 | 1 | 0.5 | Nonsectarian |
| Fayette Mennonite School | 19.2 |
Regular elementary or secondary | 1-8 | 37 | 12.3 | Mennonite |
| St John Of Rochester School | 19.5 |
Regular elementary or secondary | Pre-KG-6 | 133 | 12.7 | Roman Catholic |
| Penfield Village Nursery School And Kindergarten | 20.0 |
Early childhood program/child care center | Pre-KG-Trans. KG | 21 | 11.1 | Nonsectarian |
| St Joseph Elementary School | 20.3 |
Regular elementary or secondary | Pre-KG-6 | 303 | 14.6 | Roman Catholic |
| Holy Trinity School | 20.8 |
Regular elementary or secondary | Pre-KG-6 | 101 | 9.5 | Roman Catholic |
| St Louis School | 21.4 |
Regular elementary or secondary | Pre-KG-6 | 318 | 14.1 | Roman Catholic |
| Webster Montessori School | 21.5 |
Montessori | Pre-KG-4 | 66 | 12.4 | Nonsectarian |
| Kashong School | 21.8 |
Regular elementary or secondary | 1-8 | 33 | 16.5 | Mennonite |
| Small World Nursery & Kindergarten | 22.2 |
Early childhood program/child care center | Pre-KG-KG | 9 | 4.7 | Nonsectarian |
| Conquest Parochial School | 22.3 |
Regular elementary or secondary | 1-8 | 38 | 14.6 | Mennonite |
| Rochester Christian School | 22.5 |
Regular elementary or secondary | Pre-KG-8 | 171 | 13.9 | Christian (no specific denomination) |
| New Conquest Mennonite School | 22.6 |
Regular elementary or secondary | 1-8 | 27 | 13.5 | Mennonite |
| Sunny Haven Mennonite School | 22.6 |
Regular elementary or secondary | 1-7 | 14 | 14.0 | Mennonite |
| Townline School | 23.0 |
Regular elementary or secondary | 1-8 | 28 | 14.0 | Mennonite |
| St Rita School | 23.7 |
Regular elementary or secondary | Pre-KG-6 | 291 | 15.0 | Roman Catholic |
| Benton Mennonite School | 23.7 |
Regular elementary or secondary | 1-8 | 32 | 16.0 | Mennonite |
| Valley View School | 23.8 |
Regular elementary or secondary | 1-8 | 21 | 11.1 | Mennonite |
| Bates-rich Beginnings Child Care | 24.0 |
Early childhood program/child care center | Pre-KG-KG | 17 | 8.9 | Nonsectarian |
| Montessori School Of Rochester | 24.4 |
Montessori | Pre-KG-KG | 8 | 4.0 | Nonsectarian |
| Seton Catholic School | 24.4 |
Regular elementary or secondary | Pre-KG-6 | 323 | 14.7 | Roman Catholic |
| Cranberry Marsh School | 24.6 |
Regular elementary or secondary | 1-8 | 20 | 20.0 | Amish |
| Pinnacle Lutheran School | 24.7 |
Early childhood program/child care center | Pre-KG-KG | 20 | 3.6 | Lutheran Church - Missouri Synod |
