| Greece Christian School | 2.3 |
Regular elementary or secondary | KG-8 | 184 | 16.0 | Assembly of God |
| Greece Montessori School | 2.7 |
Montessori | Pre-KG-KG | 33 | 8.2 | Nonsectarian |
| Our Mother Of Sorrows School | 4.1 |
Regular elementary or secondary | KG-8 | 241 | 11.8 | Roman Catholic |
| St John The Evangelist School | 4.3 |
Regular elementary or secondary | Pre-KG-6 | 109 | 10.8 | Roman Catholic |
| Catherine Mcauley Catholic School | 4.5 |
Regular elementary or secondary | Pre-KG-6 | 66 | 6.9 | Roman Catholic |
| St Paul Lutheran School | 5.0 |
Regular elementary or secondary | Pre-KG-8 | 66 | 10.0 | Lutheran Church - Missouri Synod |
| Cathedral School At Holy Rosary | 5.8 |
Regular elementary or secondary | Pre-KG-6 | 106 | 9.0 | Roman Catholic |
| North Baptist Christian School | 6.3 |
Regular elementary or secondary | Pre-KG-6 | 91 | 9.2 | Baptist |
| Holy Cross School | 6.3 |
Regular elementary or secondary | Pre-KG-8 | 162 | 10.6 | Roman Catholic |
| Holy Family School | 6.6 |
Regular elementary or secondary | Pre-KG-6 | 108 | 9.7 | Roman Catholic |
| St Margaret Mary School | 6.6 |
Regular elementary or secondary | Pre-KG-6 | 103 | 8.7 | Roman Catholic |
| Northside Christian Academy | 7.7 |
Regular elementary or secondary | Pre-KG-8 | 16 | 3.0 | Church of Christ |
| Christ The King Elem School | 7.9 |
Regular elementary or secondary | Pre-KG-6 | 126 | 10.0 | Roman Catholic |
| St Pius Tenth School | 8.0 |
Regular elementary or secondary | Pre-KG-6 | 203 | 12.2 | Roman Catholic |
| St Andrew Elementary School | 8.1 |
Regular elementary or secondary | Pre-KG-6 | 95 | 9.9 | Roman Catholic |
| Derech Hatorah-rochester | 8.1 |
Regular elementary or secondary | KG-8 | 62 | 6.2 | Jewish |
| St Boniface Elementary School | 8.8 |
Regular elementary or secondary | Pre-KG-6 | 116 | 11.8 | Roman Catholic |
| Corpus Christi School | 9.3 |
Regular elementary or secondary | Pre-KG-6 | 85 | 9.6 | Roman Catholic |
| Bay Knoll Sda School | 9.6 |
Regular elementary or secondary | Pre-KG-8 | 22 | 7.3 | Seventh-Day Adventist |
| St John Neumann School | 9.6 |
Regular elementary or secondary | Pre-KG-6 | 113 | 9.4 | Roman Catholic |
| Margaret's House Early Childhood At Rit | 10.0 |
Early childhood program/child care center | Pre-KG-KG | 11 | 11.0 | Nonsectarian |
| Destiny School For The Gifted And Talented | 10.2 |
Regular elementary or secondary | KG-6 | 30 | 4.3 | Christian (no specific denomination) |
| Westfall Academy | 10.4 |
Regular elementary or secondary | Pre-KG-4 | 30 | 3.6 | Islamic |
| Hillel Community Day School | 10.4 |
Regular elementary or secondary | KG-7 | 66 | 3.3 | Jewish |
| Christ Community Church School | 10.6 |
Regular elementary or secondary | KG-8 | 41 | 8.2 | Christian (no specific denomination) |
| Seton Catholic School | 10.8 |
Regular elementary or secondary | Pre-KG-6 | 323 | 14.7 | Roman Catholic |
| St Rita School | 11.5 |
Regular elementary or secondary | Pre-KG-6 | 291 | 15.0 | Roman Catholic |
| Montessori School Of Rochester | 11.6 |
Montessori | Pre-KG-KG | 8 | 4.0 | Nonsectarian |
| Bates-rich Beginnings Child Care | 12.0 |
Early childhood program/child care center | Pre-KG-KG | 17 | 8.9 | Nonsectarian |
| Rochester Christian School | 12.1 |
Regular elementary or secondary | Pre-KG-8 | 171 | 13.9 | Christian (no specific denomination) |
| Small World Nursery & Kindergarten | 12.5 |
Early childhood program/child care center | Pre-KG-KG | 9 | 4.7 | Nonsectarian |
| Pinnacle Lutheran School | 12.8 |
Early childhood program/child care center | Pre-KG-KG | 20 | 3.6 | Lutheran Church - Missouri Synod |
| Webster Montessori School | 13.4 |
Montessori | Pre-KG-4 | 66 | 12.4 | Nonsectarian |
| Good Shepherd School | 13.4 |
Regular elementary or secondary | Pre-KG-6 | 103 | 9.3 | Roman Catholic |
| St Joseph Elementary School | 14.4 |
Regular elementary or secondary | Pre-KG-6 | 303 | 14.6 | Roman Catholic |
| St Louis School | 14.7 |
Regular elementary or secondary | Pre-KG-6 | 318 | 14.1 | Roman Catholic |
| Penfield Village Nursery School And Kindergarten | 14.8 |
Early childhood program/child care center | Pre-KG-Trans. KG | 21 | 11.1 | Nonsectarian |
| Holy Trinity School | 14.9 |
Regular elementary or secondary | Pre-KG-6 | 101 | 9.5 | Roman Catholic |
| Sandy Creek Academy/day Care Center | 15.0 |
Regular elementary or secondary | Pre-KG-5 | 10 | 5.0 | Seventh-Day Adventist |
| St John Of Rochester School | 16.8 |
Regular elementary or secondary | Pre-KG-6 | 133 | 12.7 | Roman Catholic |
| Fairport Montessori School | 17.6 |
Montessori | 1-1 | 1 | 0.5 | Nonsectarian |
| Tot-al Care Kindergarten | 18.1 |
Early childhood program/child care center | Pre-KG-KG | 7 | 7.0 | Nonsectarian |
| Holy Family School | 21.6 |
Regular elementary or secondary | KG-8 | 128 | 9.6 | Roman Catholic |
| St Agnes Elementary School | 21.9 |
Regular elementary or secondary | Pre-KG-6 | 87 | 8.7 | Roman Catholic |
