| The Harker School | 1.0 |
Regular elementary or secondary | 9-12 | 666 | 8.3 | Nonsectarian |
| St Lawrence Academy | 3.0 |
Regular elementary or secondary | 9-12 | 314 | 13.0 | Roman Catholic |
| Bellarmine College Prep School | 4.3 |
Regular elementary or secondary | 9-12 | 1575 | 18.9 | Roman Catholic |
| Presentation High School | 5.5 |
Regular elementary or secondary | 9-12 | 819 | 18.1 | Roman Catholic |
| Notre Dame High School | 6.0 |
Regular elementary or secondary | 9-12 | 634 | 16.1 | Roman Catholic |
| St Francis High School | 6.4 |
Regular elementary or secondary | 9-12 | 1622 | 17.2 | Roman Catholic |
| Mountain View Academy | 7.4 |
Regular elementary or secondary | 9-12 | 158 | 15.2 | Seventh-Day Adventist |
| School For Independent Learners | 8.9 |
Alternative/other | 9-12 | 125 | 4.0 | Nonsectarian |
| Palo Alto Prep | 9.6 |
Regular elementary or secondary | 9-12 | 60 | 8.6 | Nonsectarian |
| Kehillah Jewish High School | 9.8 |
Regular elementary or secondary | 9-12 | 108 | 6.5 | Jewish |
| Starlight High | 12.9 |
Special education | 8-12 | 30 | 7.5 | Nonsectarian |
| Mid-peninsula High School | 14.2 |
Regular elementary or secondary | 9-12 | 121 | 7.8 | Nonsectarian |
| Sacred Heart Preparatory | 14.4 |
Regular elementary or secondary | 9-12 | 527 | 7.6 | Roman Catholic |
| Alsion Middle/high School | 15.5 |
Montessori | 7-12 | 53 | 11.0 | Nonsectarian |
| Beach High School | 18.2 |
Alternative/other | 9-12 | 29 | 290.0 | Nonsectarian |
| Merit Academy | 20.7 |
Regular elementary or secondary | 9-12 | 24 | 4.3 | Nonsectarian |
| Notre Dame High School | 21.2 |
Regular elementary or secondary | 9-12 | 651 | 11.1 | Roman Catholic |
| Moreau Catholic High School | 23.0 |
Regular elementary or secondary | 9-12 | 904 | 18.4 | Roman Catholic |
| Empire Academy | 23.6 |
Regular elementary or secondary | 7-12 | 37 | 4.2 | Nonsectarian |
| Junipero Serra High School | 24.0 |
Regular elementary or secondary | 9-12 | 1000 | 14.1 | Roman Catholic |
| Victory Academy | 24.7 |
Regular elementary or secondary | 7-11 | 6 | 2.5 | Nonsectarian |
| Santa Cruz Waldorf High School | 24.8 |
Special program emphasis | 9-12 | 52 | 5.7 | Nonsectarian |
