| Western Christian Academy | 1.2 |
Regular elementary or secondary | Trans. 1-12 | 61 | 30.5 | Christian (no specific denomination) |
| Master''s Grace Academy | 15.3 |
Regular elementary or secondary | 2-11 | 6 | 6.0 | Nonsectarian |
| Clovis Christian School | 17.9 |
Regular elementary or secondary | Pre-KG-12 | 214 | 14.8 | Christian (no specific denomination) |
| Fresno Christian Schools | 18.6 |
Regular elementary or secondary | KG-12 | 733 | 15.9 | Christian (no specific denomination) |
| Sierra View Christian Academy | 18.7 |
Regular elementary or secondary | 2-9 | 14 | 2.8 | Christian (no specific denomination) |
| Bible Christian Academy | 19.7 |
Regular elementary or secondary | 1-12 | 40 | 3.5 | Jewish |
| Souls Harbor Christian Academy | 20.5 |
Regular elementary or secondary | 3-12 | 19 | 6.3 | Pentecostal |
| Bethel Christian Academy | 21.0 |
Regular elementary or secondary | KG-12 | 81 | 7.4 | Pentecostal |
| Central Valley Christian Academy | 21.4 |
Regular elementary or secondary | KG-12 | 54 | 8.2 | Christian (no specific denomination) |
| Truth Tabernacle Christian School | 21.4 |
Regular elementary or secondary | KG-12 | 88 | 12.1 | Pentecostal |
| Fresno Adventist Academy | 21.5 |
Regular elementary or secondary | KG-12 | 212 | 12.4 | Seventh-Day Adventist |
| Campus Christian Academy | 22.2 |
Regular elementary or secondary | KG-12 | 89 | 3.0 | Nonsectarian |
| Faith Baptist Academy | 23.8 |
Regular elementary or secondary | KG-12 | 59 | 9.4 | Baptist |
| Sequoia Christian School | 24.1 |
Regular elementary or secondary | 1-9 | 32 | 10.7 | Mennonite |
