| Santa Fe Girls' School | 1.5 |
Regular elementary or secondary | 6-8 | 41 | 6.7 | Nonsectarian |
| Little Earth School | 1.5 |
Regular elementary or secondary | Pre-KG-4 | 26 | 2.8 | Nonsectarian |
| Temple Beth Shalom Preschool | 2.8 |
Early childhood program/child care center | Pre-KG-KG | 8 | 8.0 | Jewish |
| Rio Grande School | 2.9 |
Regular elementary or secondary | Pre-KG-6 | 128 | 11.2 | Nonsectarian |
| La Casa Feliz | 3.3 |
Early childhood program/child care center | Pre-KG-KG | 7 | 3.5 | Nonsectarian |
| Fayette St Academy | 3.7 |
Regular elementary or secondary | 1-8 | 45 | 7.4 | Nonsectarian |
| Tara School | 3.9 |
Regular elementary or secondary | KG-5 | 17 | 6.8 | Nonsectarian |
| Mission Viejo Christian Academy | 4.0 |
Regular elementary or secondary | Pre-KG-8 | 127 | 11.8 | Christian (no specific denomination) |
| Santo Ninos Regional Catholic School | 4.5 |
Regular elementary or secondary | Pre-KG-6 | 361 | 12.9 | Roman Catholic |
| La Casita Preschool | 4.7 |
Early childhood program/child care center | Pre-KG-Trans. KG | 4 | 4.0 | Nonsectarian |
| Desert Montessori School | 6.0 |
Montessori | Pre-KG-6 | 46 | 8.7 | Nonsectarian |
| Santa Fe School For The Arts | 6.3 |
Special program emphasis | Pre-KG-8 | 88 | 8.8 | Nonsectarian |
| Childrens Garden Montessori | 6.7 |
Montessori | Pre-KG-KG | 6 | 1.4 | Nonsectarian |
| Innesence School | 19.3 |
Regular elementary or secondary | KG-7 | 10 | 4.2 | Christian (no specific denomination) |
| Ponderosa Montessori School | 20.0 |
Montessori | Pre-KG-4 | 21 | 10.5 | Nonsectarian |
| The Trio School | 24.0 |
Montessori | Pre-KG-KG | 10 | 5.0 | Nonsectarian |
