| Cathedral Academy | 2.6 |
Regular elementary or secondary | KG-12 | 302 | 16.3 | Christian (no specific denomination) |
| Northside Christian School | 3.9 |
Regular elementary or secondary | Pre-KG-12 | 368 | 10.7 | Baptist |
| Ferndale Baptist School | 3.9 |
Regular elementary or secondary | Pre-KG-12 | 98 | 8.6 | Baptist |
| Northwood Academy | 5.3 |
Regular elementary or secondary | KG-12 | 815 | 12.5 | Christian (no specific denomination) |
| Northwood Academy | 5.3 |
Regular elementary or secondary | KG-12 | 819 | 12.5 | Other |
| Northwood Academy | 5.4 |
Regular elementary or secondary | Pre-KG-12 | 803 | 34.0 | Christian (no specific denomination) |
| Eagle Military Academy | 7.2 |
Alternative/other | 3-12 | 84 | 15.0 | Christian (no specific denomination) |
| Palmetto Pines Rtc - Charlestown | 7.3 |
Alternative/other | 6-12 | 49 | 12.2 | Nonsectarian |
| Grace Christian Academy | 7.4 |
Regular elementary or secondary | KG-12 | 142 | 12.9 | Pentecostal |
| The Remnant Christian School | 8.2 |
Regular elementary or secondary | 6-12 | 14 | 14.0 | Christian (no specific denomination) |
| Capers Preparatory Christian Academy | 9.3 |
Regular elementary or secondary | KG-11 | 44 | 6.3 | Christian (no specific denomination) |
| Faith Christian School And Daycare | 9.6 |
Regular elementary or secondary | Pre-KG-12 | 271 | 12.4 | Assembly of God |
| Porter-gaud School | 10.3 |
Regular elementary or secondary | KG-12 | 917 | 7.8 | Episcopal |
| James Island Christian School | 10.6 |
Regular elementary or secondary | Pre-KG-12 | 210 | 9.6 | Christian (no specific denomination) |
| Ridge Christian Academy | 10.7 |
Regular elementary or secondary | Pre-KG-12 | 124 | 8.6 | Baptist |
| First Baptist Church School | 11.5 |
Regular elementary or secondary | Pre-KG-12 | 487 | 10.4 | Baptist |
| Charleston Collegiate School | 12.6 |
Regular elementary or secondary | Pre-KG-12 | 250 | 7.5 | Nonsectarian |
| Trident Academy | 13.2 |
Special education | KG-12 | 88 | 2.7 | Nonsectarian |
| Pinewood Preparatory School | 13.6 |
Regular elementary or secondary | Pre-KG-12 | 767 | 12.3 | Nonsectarian |
| St Pauls Academy | 13.9 |
Regular elementary or secondary | Pre-KG-12 | 84 | 8.4 | Nonsectarian |
| First Baptist Church School | 14.0 |
Regular elementary or secondary | Pre-KG-12 | 218 | 4.6 | Baptist |
| St John's Christian Academy | 21.5 |
Regular elementary or secondary | Pre-KG-12 | 355 | 12.5 | Christian (no specific denomination) |
